A Database of Drosophila Genes & Genomes

FB2008_05, released May 30, 2008
 

Textpresso for Fly

FlyBase is pleased to announce the addition of a link to "Textpresso for Fly", a full-text search engine for the biological literature of the Drosophilidae. Textpresso for Fly currently contains 20,000 full text articles and 39,000 abstracts from the Drosophila literature.

Searches with keywords yield hits that consist of abstracts and (where available) complete sentences from the full text of the matching papers. In addition, more powerful and refined searches can be done with the use of categories. Categories are collections of conceptually related words whose occurrences have been marked up in the full text. For example, if one is interested in finding papers discussing the regulation of bcd, one would type the keyword "bcd" and specify the category "regulation". The search engine then returns sentences from full texts that contain at least one mention of the gene 'bcd' and at least one word or phrase from the list of terms comprising the "regulation" category. The lists of ~100 category types and their constituent terms are easily accessed from the Textpresso site. Links from the Textpresso reports lead users to the FyBase reference reports, from which the FlyBase-curated data can be accessed.

The link to "Textpresso for Fly" may be found in the "Resources" menu of the navigation bar.